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Leopard Technical Q&As: Porting
Java is closely integrated with key Apple technologies and supported by key Apple tools. Tight integration with Aqua and Quartz Extreme, for example, make Mac OS X the best platform for developing and deploying Java applications. Developers can create Java applications using Xcode and they can turn Java applications into double-clickable Mac OS X applications using Jar Bundler.

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Java on Intel-based Macs (HTML)
QA1295: Required changes (if any) for Java applications to run on Intel-based Macs.
Server Processes and the Dock (HTML) (日本語 HTML)
QA1328: Discusses using headless AWT from Java server applications that need to be hidden.
Setting environment variables for user processes (HTML)
QA1067: Tells how to set environment variables for user processes.